Gene
dcaf13
- ID
- ZDB-GENE-040426-703
- Name
- ddb1 and cul4 associated factor 13
- Symbol
- dcaf13 Nomenclature History
- Previous Names
-
- wdsof1
- zgc:55391 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to Cul4-RING E3 ubiquitin ligase complex; nucleolus; and small-subunit processome. Orthologous to human DCAF13 (DDB1 and CUL4 associated factor 13).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019775 | WD40 repeat, conserved site |
| Domain | IPR007287 | Sof1-like protein |
| Family | IPR051733 | WD repeat-containing DCAF13/WDSOF1 |
| Homologous_superfamily | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| Homologous_superfamily | IPR036322 | WD40-repeat-containing domain superfamily |
| Repeat | IPR001680 | WD40 repeat |
Domain Details Per Protein
| Protein | Length | Sof1-like protein | WD40 repeat | WD40 repeat, conserved site | WD40-repeat-containing domain superfamily | WD40/YVTN repeat-like-containing domain superfamily | WD repeat-containing DCAF13/WDSOF1 |
|---|---|---|---|---|---|---|---|
|
UniProtKB:Q803X4
|
445 | ||||||
|
UniProtKB:B2GQH5
|
445 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
dcaf13-201
(1)
|
Ensembl | 1,740 nt | ||
| ncRNA |
dcaf13-002
(1)
|
Ensembl | 694 nt | ||
| ncRNA |
dcaf13-003
(1)
|
Ensembl | 788 nt |
Interactions and Pathways
No data available
Plasmids
No data available